Class for tagging cells in AdvectionDiffusion physics. More...

Inheritance diagram for Physics::AdvectionDiffusion::AdvectionDiffusionTagger:

Collaboration diagram for Physics::AdvectionDiffusion::AdvectionDiffusionTagger:

Public Member Functions
	AdvectionDiffusionTagger ()=delete
	Disallowed weak construction.

	AdvectionDiffusionTagger (RefCountedPtr< CdrSolver > &a_solver, RefCountedPtr< AmrMesh > &a_amr)
	Constructor.

virtual	~AdvectionDiffusionTagger ()
	Destructor (does nothing)

void	regrid () override
	Regrid method.

void	parseOptions () override
	Parse options.

bool	tagCells (EBAMRTags &a_tags) override
	Flag cells for refinement.

Public Member Functions inherited from CellTagger
	CellTagger ()
	Weak constructor (does nothing)

virtual	~CellTagger ()
	Destructor (does nothing).

virtual void	preRegrid () noexcept
	Pre-regrid function for cell-tagger.

virtual void	parseRuntimeOptions ()
	Parse runtime class options.

virtual void	prePlot () const noexcept
	Perform pre-plotting operations (if necessary)

virtual int	getNumberOfPlotVariables () const
	Get number of plot variables that will be written to file (by Driver).

virtual Vector< std::string >	getPlotVariableNames () const
	Get plot variable names.

virtual void	writePlotData (LevelData< EBCellFAB > &a_output, int &a_icomp, const std::string a_outputRealm, const int a_level) const
	Write plot data.

virtual int	getBuffer () const
	Get tag buffer.

Protected Attributes
std::string	m_realm
	Realm where solver is registered.

RefCountedPtr< CdrSolver >	m_solver
	Reference to CdrSolver.

RefCountedPtr< AmrMesh >	m_amr
	Reference to AmrMesh.

Real	m_refCurv
	Refinement threshold for curvature-based refinement.

Real	m_refMagn
	Refinement threshold for magnitude-based refinement.

Protected Attributes inherited from CellTagger
std::string	m_name
	Cell tagger class name (default is CellTagger).

int	m_verbosity
	Class verbosity.

int	m_buffer
	Tag buffer. Grow tags by this amount (finest level only)

Vector< RealBox >	m_tagBoxes
	Boxes that can be used to restrict tagging.

std::vector< std::pair< RealBox, int > >	m_refBoxes
	Refinement boxes for adding manual refinement.

Additional Inherited Members
Protected Member Functions inherited from CellTagger
bool	insideTagBox (const RealVect a_pos) const
	Check if a point is inside a tagging box.

int	getManualRefinementLevel (const RealVect a_pos) const
	Get the specified level for this position when doing manual refinement.

virtual void	parseTagBoxes ()
	Parse boxes.

virtual void	parseRefinementBoxes ()
	Parse refinement boxes.

virtual void	parseBuffer ()
	Parse refinement buffer.

virtual void	parseVerbosity ()
	Parse the verbosity from the input file or command line.

Detailed Description

Class for tagging cells in AdvectionDiffusion physics.

This class refines cells if grad(phi)*dx/phi > r1 or if phi > r2.

Constructor & Destructor Documentation

AdvectionDiffusionTagger::AdvectionDiffusionTagger	(	RefCountedPtr< CdrSolver > &	a_solver,
		RefCountedPtr< AmrMesh > &	a_amr
	)

Constructor.

Parameters

[in]	a_solver	Cdr solver reference – needed in order to fetch data used for tagging
[in]	a_amr	AmrMesh solver reference

void AdvectionDiffusionTagger::parseOptions ( )

overridevirtual

Parse options.

Parses m_refCurv and m_refMagn.

Implements CellTagger.

void AdvectionDiffusionTagger::regrid ( )

overridevirtual

Regrid method.

Does nothing, but is overriden because parent method is pure.

Implements CellTagger.

bool AdvectionDiffusionTagger::tagCells ( EBAMRTags & a_tags )

overridevirtual

Flag cells for refinement.

Parameters

[in,out] a_tags Cell tags across AMR hierarchy. See CellTagger for details.

Implements CellTagger.

The documentation for this class was generated from the following files: