CD_DischargeIO.H

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/* chombo-discharge
 * Copyright © 2021 SINTEF Energy Research.
 * Please refer to Copyright.txt and LICENSE in the chombo-discharge root directory.
 */
 
#ifndef CD_DischargeIO_H
#define CD_DischargeIO_H
 
// Std includes
#include <string>
 
// Chombo includes
#include <REAL.H>
#include <RealVect.H>
#include <IntVect.H>
#include <Vector.H>
#include <DisjointBoxLayout.H>
#include <LevelData.H>
#include <EBCellFAB.H>
#include <ParticleIO.H>
#include <ProblemDomain.H>
 
// Our includes
#include <CD_EBAMRData.H>
#include <CD_ParticleContainer.H>
#include <CD_GenericParticle.H>
#include <CD_NamespaceHeader.H>
 
namespace DischargeIO {
  std::string
  numberFmt(const long long a_number, char a_sep = ',') noexcept;
 
  Vector<std::string>
  numberFmt(const Vector<long long> a_numbers, char a_sep = ',') noexcept;
 
#ifdef CH_USE_HDF5
  void
  writeEBHDF5(const std::string&                   a_filename,
              const Vector<std::string>&           a_variableNames,
              const Vector<DisjointBoxLayout>&     a_grids,
              const Vector<LevelData<EBCellFAB>*>& a_data,
              const Vector<ProblemDomain>&         a_domains,
              const Vector<Real>                   a_dx,
              const Vector<int>                    a_refinementRatios,
              const Real                           a_dt,
              const Real                           a_time,
              const RealVect                       a_probLo,
              const int                            a_numLevels,
              const int                            a_numGhost) noexcept;
#endif
 
#ifdef CH_USE_HDF5
  void
  writeEBHDF5Header(HDF5Handle&                a_handleH5,
                    const int                  a_numLevels,
                    const RealVect&            a_probLo,
                    const Vector<std::string>& a_variableNames) noexcept;
 
#endif
 
#ifdef CH_USE_HDF5
  void
  writeEBHDF5Level(HDF5Handle&                 a_handleH5,
                   const LevelData<EBCellFAB>& a_outputData,
                   const ProblemDomain         a_domain,
                   const Real                  a_dx,
                   const Real                  a_dt,
                   const Real                  a_time,
                   const int                   a_level,
                   const int                   a_refRatio,
                   const int                   a_numGhost) noexcept;
#endif
 
#ifdef CH_USE_HDF5
  void
  writeEBHDF5(const EBAMRCellData& a_data, const std::string& a_file);
#endif
 
  template <size_t M, size_t N>
  void
  writeH5Part(const std::string                               a_filename,
              const ParticleContainer<GenericParticle<M, N>>& a_particles,
              const std::vector<std::string>                  a_realVars = std::vector<std::string>(),
              const std::vector<std::string>                  a_vectVars = std::vector<std::string>(),
              const RealVect                                  a_shift    = RealVect::Zero,
              const Real                                      a_time     = 0.0) noexcept;
 
#ifdef CH_USE_HDF5
  template <class P>
  void
  writeCheckParticlesToHDF(HDF5Handle& a_handle, const ParticleData<P>& a_particles, const std::string& a_dataType);
 
  template <class P>
  void
  readCheckParticlesFromHDF(HDF5Handle& a_handle, ParticleData<P>& a_particles, const std::string& a_dataType);
#endif
} // namespace DischargeIO
 
#include <CD_NamespaceFooter.H>
 
#include <CD_DischargeIOImplem.H>
 
#endif